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Had the imprisoned bishops been free to cast their votes against the measure, or had the lay peers who disliked it had the courage to be present in their places at the division the whole course of English history might have been altered.[7] As it was a religious revolution had been effected. The Mass, Transubstantiation, the Real Presence and Roman supremacy, all of which had been accepted without contradiction from the days of St. Augustine till the reign of Henry VIII., were abolished and a new church established that bore but a faint resemblance to the old. And what was more extraordinary still, all this was done solely by an assembly of laymen, against the wishes and appeals of the united episcopate and against the practically unanimous judgment of Convocation. "The Church of England as by law established"is a parliamentary institution set up and shaped by Parliament in the beginning, and dependent upon Parliament ever since for guidance and protection.

By the Act of Supremacy the queen was declared to be supreme governor of the Church in England; all foreign jurisdiction was abolished; a body of commissioners was to be appointed to administer the oath of supremacy and to carry on ecclesiastical functions in the name of the queen; officials who refused to take the oath were to be deprived, and penalties varying from fines to death were to be imposed on those who were unwilling to accept the law. By the Act of Uniformity the English service, as contained in the Second Book of Common Prayer with some slight alterations, was made obligatory on all clergymen, as was attendance at this service on all laymen. The Act was to be enforced by the spiritual authorities under threat of excommunication against offenders, and by the civil authorities by the infliction of fines or imprisonment.

A royal commission was appointed (1559) to administer the oath of supremacy to the clergy, and to enforce the provisions of the Act of Uniformity. As was to be expected, the attention of the commissioners was directed immediately to the bishops. If some of them could be induced to submit--and the government was not without hope in this direction--their submission would produce a good impression on the country; but if on the contrary they persisted in their attachment to the Mass and their obedience to the Pope, they must be removed to make way for more trustworthy men. To their credit be it said, when the oath of supremacy was tendered to the bishops they refused with one exception to abandon the views they had defended with such skill and bravery in the House of Lords, and preferred to suffer imprisonment and deprivation rather than lead their people into error by submission. Bishop Kitchin of Llandaff had opposed royal supremacy for a time. The Spanish ambassador reported to his master that he was about to follow the example of his brethren, but in the end he submitted and consented to administer the oath to his clergy.[8] The religious communities, the Observants, the Carthusians, the Dominicans, the Benedictines, and the few communities of nuns that had re-established houses in England during the reign of Queen Mary, were suppressed; their property was seized according to an Act passed in the late Parliament, and many of the monks and nuns were obliged to depart from the kingdom. The commissioners proceeded through England administering the oath to the clergy, a large percentage of whom seems to have submitted. From the returns preserved it is difficult to estimate accurately what number of the clergy consented to acknowledge the supremacy of the queen or to abandon the Mass, but it is certainly not true to say that out of 9,000 beneficed clergymen in England at the time only about 200 refused the oath. On the one hand, the disturbances during the reigns of Henry VIII. and Edward VI. had reduced considerably the number of priests in England, while on the other, the fact that several clergymen did not put in an appearance before the commission, that others were allowed time to reconsider their views, and that not even all those who obstinately refused the oath were deprived, shows clearly that the lists of deprivations afford no sure clue to the number of those who were unwilling to accept the change. It is noteworthy that the greatest number of refusals were met with amongst the higher officials or dignitaries of the Church, the deans, archdeacons, and canons, who might be expected to represent the best educated and most exemplary of the clergy of their time in England. In the universities, too, the commissioners met with the strongest resistance. Several of the heads of the colleges, both in Cambridge and Oxford, the fellows and the office-bearers, either were deprived or fled, and men of the new school were appointed to take their places. But notwithstanding all the government could do, the universities, and particularly Oxford, continued during the greater part of the reign of Elizabeth to be centres of disaffection.[9]